Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00109 | O31516 | - | 115715 - 117499 | 67081.0 |
| autoinducer 2-binding protein lsrb | GGADHKLB_00110 | Q8Z2X8 | + | 117711 - 118763 | 37335.9 |
| ribose import atp-binding protein rbsa | GGADHKLB_00111 | Q87ZE0 | + | 118839 - 120305 | 54243.0 |
| ribose import permease protein rbsc | GGADHKLB_00112 | P36948 | + | 120302 - 121291 | 35463.9 |
| l-arabinose transport system permease protein arah | GGADHKLB_00113 | P36948 | + | 121303 - 122322 | 36226.9 |
| 3-hexulose-6-phosphate isomerase | GGADHKLB_00114 | Q9LBW5 | + | 122338 - 122907 | 21613.3 |
| response regulator saer | GGADHKLB_00115 | Q06239 | + | 123296 - 123985 | 26610.1 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00116 | Q06240 | + | 123975 - 125216 | 47191.8 |
| hypothetical protein | GGADHKLB_00117 | O07522 | + | 125227 - 126177 | 36147.1 |
| dna replication and repair protein recf | GGADHKLB_00118 | O08455 | + | 126180 - 127727 | 60028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.