Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | GGADHKLB_00089 | Q8XHG1 | + | 92764 - 94677 | 72037.3 |
| meso-diaminopimelate d-dehydrogenase | GGADHKLB_00090 | G1UII1 | + | 94779 - 95765 | 36122.1 |
| putative metal-dependent hydrolase ycfh | GGADHKLB_00091 | P37545 | + | 95785 - 96546 | 28961.7 |
| ribosomal rna small subunit methyltransferase a | GGADHKLB_00092 | A9KL97 | + | 96738 - 97613 | 32674.6 |
| 2-methylcitrate synthase 2 | GGADHKLB_00093 | Q59977 | + | 97673 - 99043 | 52127.9 |
| monoacylglycerol lipase | GGADHKLB_00094 | O07427 | + | 99044 - 99982 | 36220.3 |
| nadp-dependent 7-alpha-hydroxysteroid dehydrogenase | GGADHKLB_00095 | G9FRD7 | + | 100076 - 100876 | 28545.1 |
| is66 family transposase iscde1 | GGADHKLB_00096 | P55630 | - | 101288 - 102910 | 62243.4 |
| hypothetical protein | GGADHKLB_00097 | P55503 | - | 103284 - 103559 | 10467.7 |
| hypothetical protein | GGADHKLB_00098 | Not Available | - | 103549 - 103938 | 14391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.