Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline racemase | GGADHKLB_00079 | E3PTZ4 | + | 76518 - 77561 | 38372.0 |
| hypothetical protein | GGADHKLB_00080 | Not Available | - | 77657 - 79393 | 65105.8 |
| hypothetical protein | GGADHKLB_00081 | Q82Z76 | + | 79518 - 80225 | 27833.1 |
| hypothetical protein | GGADHKLB_00082 | Not Available | + | 80227 - 81549 | 50305.8 |
| hypothetical protein | GGADHKLB_00083 | Not Available | + | 81685 - 82311 | 23151.1 |
| sensor histidine kinase rcsc | GGADHKLB_00084 | Q86CZ2 | + | 82502 - 84208 | 64898.0 |
| hypothetical protein | GGADHKLB_00085 | Not Available | + | 84205 - 87840 | 132291.0 |
| hypothetical protein | GGADHKLB_00086 | P94474 | + | 87837 - 88790 | 35764.3 |
| hypothetical protein | GGADHKLB_00087 | Not Available | + | 88783 - 89955 | 43823.6 |
| hypothetical protein | GGADHKLB_00088 | P94476 | + | 90008 - 92338 | 87511.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.