Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inosose dehydratase | GGADHKLB_00049 | Q4AAA6 | + | 46194 - 46991 | 30774.0 |
| ribose import atp-binding protein rbsa | GGADHKLB_00050 | Q8RBQ1 | + | 47009 - 48508 | 55736.0 |
| ribose import permease protein rbsc | GGADHKLB_00051 | P0AGI3 | + | 48524 - 49456 | 32942.7 |
| hypothetical protein | GGADHKLB_00052 | Not Available | + | 49541 - 50683 | 40945.3 |
| ribose import permease protein rbsc | GGADHKLB_00053 | P23200 | + | 50709 - 51668 | 34792.2 |
| l-threonine 3-dehydrogenase | GGADHKLB_00054 | O58389 | + | 51720 - 52853 | 41887.1 |
| hypothetical protein | GGADHKLB_00055 | Q58707 | + | 52866 - 53777 | 34702.4 |
| hypothetical protein | GGADHKLB_00056 | Not Available | + | 53811 - 54932 | 41851.5 |
| inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase | GGADHKLB_00057 | P55480 | + | 54942 - 56090 | 42792.9 |
| deoxyribose-phosphate aldolase 1 | GGADHKLB_00058 | A0AKA1 | + | 56122 - 56835 | 26147.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.