Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| solute-binding protein | GGADHKLB_00039 | A1WPV4 | + | 33573 - 34601 | 38449.6 |
| sialic acid trap transporter small permease protein siaq | GGADHKLB_00040 | Q9KR65 | + | 34618 - 35118 | 17393.8 |
| c4-dicarboxylate trap transporter large permease protein dctm | GGADHKLB_00041 | Q312S1 | + | 35115 - 36404 | 45372.2 |
| hydroxypyruvate reductase | GGADHKLB_00042 | B1L765 | + | 36437 - 37453 | 37604.6 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | GGADHKLB_00043 | Q9KBI9 | + | 37469 - 38149 | 24426.7 |
| hypothetical protein | GGADHKLB_00044 | B9IS83 | + | 38314 - 39678 | 54065.5 |
| hypothetical protein | GGADHKLB_00045 | B9IS84 | + | 39675 - 40319 | 24748.0 |
| chromosome partition protein smc | GGADHKLB_00046 | B9IS85 | + | 40270 - 43614 | 131714.0 |
| l-threonine 3-dehydrogenase | GGADHKLB_00047 | O58389 | - | 43803 - 44999 | 43781.1 |
| hth-type transcriptional repressor nagr | GGADHKLB_00048 | O34817 | - | 45201 - 45992 | 29708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.