Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 1243781 - 1245305 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 1245413 - 1245530 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1245929 - 1248822 | Not Available |
| ecf rna polymerase sigma factor sigw | GGADHKLB_01221 | O05404 | + | 1249042 - 1249566 | 20489.4 |
| hypothetical protein | GGADHKLB_01222 | Not Available | + | 1249550 - 1250161 | 23550.6 |
| hypothetical protein | GGADHKLB_01223 | Q8C8H8 | + | 1250218 - 1252584 | 88805.2 |
| hypothetical protein | GGADHKLB_01224 | Not Available | + | 1252608 - 1254002 | 51502.0 |
| coenzyme a biosynthesis bifunctional protein coabc | GGADHKLB_01225 | O35033 | - | 1254090 - 1255289 | 43414.1 |
| hth-type transcriptional regulator malt | GGADHKLB_01226 | P11470 | + | 1255748 - 1257115 | 51111.9 |
| hypothetical protein | GGADHKLB_01227 | Not Available | + | 1257227 - 1258852 | 59876.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.