Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cadmium, zinc and cobalt-transporting atpase | GGADHKLB_01178 | O32219 | + | 1199462 - 1201801 | 83637.2 |
| transcriptional repressor smtb | GGADHKLB_01179 | Q55940 | + | 1201964 - 1202323 | 13828.0 |
| cadmium, zinc and cobalt-transporting atpase | GGADHKLB_01180 | O32219 | + | 1202355 - 1204217 | 68598.3 |
| hypothetical protein | GGADHKLB_01181 | Not Available | + | 1204226 - 1204750 | 19815.3 |
| gtpase hflx | GGADHKLB_01182 | D9R4W7 | + | 1204754 - 1206034 | 47818.5 |
| hth-type transcriptional activator rhas | GGADHKLB_01183 | B7LVD8 | - | 1205983 - 1206825 | 33018.4 |
| diaminopimelate epimerase | GGADHKLB_01184 | P54897 | + | 1206986 - 1207843 | 31805.3 |
| atp-dependent helicase/deoxyribonuclease subunit b | GGADHKLB_01185 | A9KTE7 | + | 1207871 - 1211215 | 128544.0 |
| atp-dependent helicase/nuclease subunit a | GGADHKLB_01186 | A9KTE6 | + | 1211219 - 1214821 | 136692.0 |
| hypothetical protein | GGADHKLB_01187 | P94519 | + | 1214818 - 1215084 | 10095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.