Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enolase | GGADHKLB_01148 | Q181T5 | + | 1173440 - 1174753 | 47833.3 |
| prophage bactoprenol glucosyl transferase | GGADHKLB_01149 | Q45539 | + | 1174853 - 1175803 | 35984.7 |
| hypothetical protein | GGADHKLB_01150 | O31582 | + | 1175800 - 1178373 | 96714.7 |
| hypothetical protein | GGADHKLB_01151 | Q5HQU8 | + | 1178450 - 1178692 | 8578.99 |
| ribonuclease r | GGADHKLB_01152 | O32231 | + | 1178776 - 1180935 | 82001.2 |
| ssra-binding protein | GGADHKLB_01153 | A9KPF1 | + | 1180916 - 1181383 | 17799.0 |
| hypothetical protein | GGADHKLB_01154 | Not Available | + | 1181394 - 1181636 | 9222.02 |
| hypothetical protein | GGADHKLB_01155 | Q2W8R8 | + | 1181666 - 1182265 | 22357.8 |
| hypothetical protein | GGADHKLB_01156 | P81958 | - | 1182399 - 1182824 | 16285.2 |
| hypothetical protein | GGADHKLB_01157 | Not Available | - | 1183082 - 1183444 | 13832.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.