Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna base-flipping protein | GGADHKLB_01128 | P0AFP2 | + | 1153506 - 1153829 | 12244.7 |
| alkaline phosphatase synthesis transcriptional regulatory protein phop | GGADHKLB_01129 | P33112 | + | 1153964 - 1154644 | 25923.6 |
| adaptive-response sensory-kinase sasa | GGADHKLB_01130 | O32193 | + | 1154632 - 1155852 | 47268.9 |
| putative abc transporter atp-binding protein yxlf | GGADHKLB_01131 | P94374 | + | 1155926 - 1156804 | 32663.2 |
| hypothetical protein | GGADHKLB_01132 | Not Available | + | 1156804 - 1158042 | 45962.0 |
| hypothetical protein | GGADHKLB_01133 | Not Available | + | 1157999 - 1158619 | 23008.0 |
| hypothetical protein | GGADHKLB_01134 | Not Available | + | 1158695 - 1159285 | 23424.9 |
| hypothetical protein | GGADHKLB_01135 | O31660 | - | 1159292 - 1160338 | 39846.7 |
| hypothetical protein | GGADHKLB_01136 | Not Available | + | 1160577 - 1160759 | 6981.43 |
| hypothetical protein | GGADHKLB_01137 | Not Available | - | 1160808 - 1161896 | 39879.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.