Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinGGADHKLB_01098Not Available+1126125 - 112726144037.2
cyclomaltodextrinaseGGADHKLB_01099Q08341-1127334 - 112864450295.4
hypothetical proteinGGADHKLB_01100Q9K3D6+1128854 - 112931817486.9
multidrug export protein mepaGGADHKLB_01101Q9WZS2-1129315 - 113066748430.4
50s ribosomal protein l13GGADHKLB_01102C4Z2W3+1130919 - 113134716126.8
30s ribosomal protein s9GGADHKLB_01103A9KJF4+1131374 - 113176614584.8
hypothetical proteinGGADHKLB_01104Not Available+1131919 - 11321197610.24
biotin synthaseGGADHKLB_01105C0QVM0+1132145 - 113311635997.4
degv domain-containing proteinGGADHKLB_01106Q8XPD7+1133229 - 113411333171.4
putative hth-type transcriptional regulatorGGADHKLB_01107Q2YZ22+1134240 - 113469217821.3

Displaying genes 1151 – 1160 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites