Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yccf | GGADHKLB_01088 | P0AB12 | - | 1118953 - 1119312 | 12669.0 |
| hypothetical protein | GGADHKLB_01089 | Q09LX1 | + | 1119578 - 1120207 | 23873.0 |
| tyrosine--trna ligase | GGADHKLB_01090 | C3KUT7 | + | 1120696 - 1121919 | 45651.0 |
| hypothetical protein | GGADHKLB_01091 | Not Available | + | 1122193 - 1122702 | 19651.5 |
| hypothetical protein | GGADHKLB_01092 | Not Available | + | 1123024 - 1123221 | 7507.05 |
| hth-type transcriptional activator bcrr | GGADHKLB_01093 | Q5WNW9 | + | 1123211 - 1123825 | 22870.2 |
| hypothetical protein | GGADHKLB_01094 | Not Available | + | 1123984 - 1124649 | 25328.4 |
| hypothetical protein | GGADHKLB_01095 | Not Available | + | 1124745 - 1124945 | 7769.45 |
| hypothetical protein | GGADHKLB_01096 | Not Available | + | 1125149 - 1125238 | 3485.03 |
| hypothetical protein | GGADHKLB_01097 | A1TEV0 | + | 1125571 - 1126122 | 21776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.