Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate lyase | GGADHKLB_01078 | Q8FDU7 | + | 1109898 - 1110818 | 33862.9 |
| sodium/glucose cotransporter | GGADHKLB_01079 | Q5E733 | + | 1110866 - 1112371 | 54230.5 |
| toxin-antitoxin biofilm protein taba | GGADHKLB_01080 | P0AF96 | + | 1112390 - 1112839 | 17372.5 |
| hypothetical protein | GGADHKLB_01081 | Not Available | + | 1112909 - 1113709 | 30391.5 |
| beta-glucoside kinase | GGADHKLB_01082 | P26832 | + | 1113706 - 1114593 | 31841.6 |
| hth-type transcriptional regulator murr | GGADHKLB_01083 | P44540 | + | 1114606 - 1115448 | 32492.1 |
| n-acetylglucosamine-6-phosphate deacetylase | GGADHKLB_01084 | P96166 | + | 1115467 - 1116597 | 40446.5 |
| 3'3'-cgamp-specific phosphodiesterase 1 | GGADHKLB_01085 | Q9KLR1 | - | 1116592 - 1117845 | 47874.6 |
| hypothetical protein | GGADHKLB_01086 | Not Available | + | 1118018 - 1118728 | 25799.6 |
| hypothetical protein | GGADHKLB_01087 | C0H447 | - | 1118725 - 1118937 | 8120.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.