Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_01058 | P42978 | + | 1088294 - 1089163 | 31528.4 |
| hypothetical protein | GGADHKLB_01059 | Not Available | + | 1089251 - 1089604 | 13386.9 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | GGADHKLB_01060 | Q9KSB1 | + | 1089601 - 1091652 | 78408.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | GGADHKLB_01061 | Q97H84 | + | 1091801 - 1093267 | 54246.1 |
| primosomal protein n' | GGADHKLB_01062 | P94461 | + | 1093257 - 1095485 | 84536.5 |
| peptide deformylase | GGADHKLB_01063 | C4ZEV9 | + | 1095499 - 1095972 | 17277.9 |
| methionyl-trna formyltransferase | GGADHKLB_01064 | C4ZEV8 | + | 1095973 - 1096911 | 34327.0 |
| hypothetical protein | GGADHKLB_01065 | O05248 | + | 1097015 - 1097716 | 25272.9 |
| ribosomal rna small subunit methyltransferase b | GGADHKLB_01066 | P94464 | + | 1097731 - 1099041 | 49782.2 |
| putative dual-specificity rna methyltransferase rlmn | GGADHKLB_01067 | A9KM95 | + | 1099034 - 1100104 | 40815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.