Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative amidase amid | GGADHKLB_01006 | A0A1P8B760 | - | 1033022 - 1034566 | 54666.9 |
| hypothetical protein | GGADHKLB_01007 | Not Available | + | 1035086 - 1035256 | 6654.38 |
| hypothetical protein | GGADHKLB_01008 | P55548 | + | 1035266 - 1036063 | 31129.9 |
| hypothetical protein | GGADHKLB_01009 | Q46M57 | - | 1036323 - 1037228 | 34364.6 |
| hypothetical protein | GGADHKLB_01010 | Not Available | + | 1037342 - 1037842 | 18856.3 |
| hypothetical protein | GGADHKLB_01011 | P20370 | + | 1037880 - 1038644 | 28179.8 |
| hca operon transcriptional activator hcar | GGADHKLB_01014 | Q47141 | - | 1039477 - 1040376 | 34098.1 |
| hypothetical protein | GGADHKLB_01015 | Not Available | + | 1040518 - 1040766 | 9766.69 |
| hypothetical protein | GGADHKLB_01016 | Q01609 | + | 1040747 - 1041688 | 35226.6 |
| hypothetical protein | GGADHKLB_01017 | Not Available | + | 1041704 - 1042219 | 18665.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.