Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00996 | Not Available | + | 1024546 - 1024689 | 5135.3 |
| hypothetical protein | GGADHKLB_00997 | P58702 | + | 1024682 - 1025155 | 17102.1 |
| hypothetical protein | GGADHKLB_00998 | Q99125 | + | 1025199 - 1026257 | 37432.7 |
| Trna-ala | Not Available | Not Available | + | 1026440 - 1026512 | Not Available |
| hypothetical protein | GGADHKLB_01000 | Not Available | - | 1026562 - 1026723 | 6297.57 |
| hypothetical protein | GGADHKLB_01001 | Not Available | + | 1027037 - 1027915 | 32214.3 |
| sensory transduction protein regx3 | GGADHKLB_01002 | Q9F868 | + | 1028085 - 1028753 | 25547.6 |
| adaptive-response sensory-kinase sasa | GGADHKLB_01003 | P23545 | + | 1028741 - 1029697 | 36882.6 |
| putative abc transporter atp-binding protein | GGADHKLB_01004 | Q58206 | + | 1029787 - 1030476 | 25257.5 |
| hypothetical protein | GGADHKLB_01005 | Not Available | + | 1030469 - 1032958 | 93755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.