Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate reductase | GGADHKLB_00948 | C0CMQ8 | - | 989654 - 990589 | 34511.5 |
| Trna-gly | Not Available | Not Available | + | 990691 - 990761 | Not Available |
| Trna-pro | Not Available | Not Available | + | 990765 - 990839 | Not Available |
| hypothetical protein | GGADHKLB_00951 | Not Available | - | 990980 - 991129 | 5442.34 |
| hypothetical protein | GGADHKLB_00952 | Not Available | - | 991146 - 991301 | 5782.9 |
| stage 0 sporulation protein a | GGADHKLB_00953 | P52939 | - | 991401 - 991736 | 13316.1 |
| hypothetical protein | GGADHKLB_00992 | Not Available | + | 1021151 - 1022005 | 32809.2 |
| hypothetical protein | GGADHKLB_00993 | Not Available | + | 1021996 - 1022997 | 37295.2 |
| hypothetical protein | GGADHKLB_00994 | Not Available | + | 1022999 - 1023814 | 28878.2 |
| hypothetical protein | GGADHKLB_00995 | Not Available | + | 1024191 - 1024529 | 12427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.