Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan o-acetyltransferase | GGADHKLB_00938 | Q51392 | + | 978681 - 980087 | 54265.6 |
| hypothetical protein | GGADHKLB_00939 | Not Available | + | 980096 - 981277 | 45568.6 |
| dual-specificity rna pseudouridine synthase rluf | GGADHKLB_00940 | P32684 | + | 981261 - 981968 | 26671.8 |
| dna ligase | GGADHKLB_00941 | A9KPL0 | + | 981955 - 983928 | 74241.6 |
| atp-dependent clp protease atp-binding subunit clpx | GGADHKLB_00942 | A0LDT3 | + | 983944 - 985371 | 53026.3 |
| na(+)/h(+)-k(+) antiporter gern | GGADHKLB_00943 | Q9KI10 | + | 985371 - 986630 | 44771.6 |
| hypothetical protein | GGADHKLB_00944 | F4HYR6 | + | 986689 - 988392 | 63069.0 |
| hypothetical protein | GGADHKLB_00945 | Not Available | + | 988427 - 988717 | 11268.3 |
| lipoprotein signal peptidase | GGADHKLB_00946 | Q8DQ64 | + | 988718 - 989179 | 16518.7 |
| hypothetical protein | GGADHKLB_00947 | P34410 | + | 989193 - 989615 | 15782.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.