Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Paucilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Paucilactobacillus |
| Species | Paucilactobacillus oligofermentans |
| Strain | AMKR18, AV56 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paucilactobacillus oligofermentans AMKR18, AV56
Accession NumberLN898144.1
Gene Summary
Adenine Count
578876 bp
Thymine Count
580527 bp
Guanine Count
319369 bp
Cytosine Count
322901 bp
Genome Length
1801673 bp
Protein-coding Genes
1680 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | LACOL_1251 | Q88V07 | - | 1272323 - 1273441 | 42586.0 |
| translocase subunit yajc | LACOL_1252 | Q9KDI4 | - | 1273599 - 1273964 | 13061.8 |
| putative trna-guanine transglycosylase | LACOL_1253 | Q88V05 | - | 1274036 - 1275178 | 43118.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | LACOL_1254 | Q88V04 | - | 1275210 - 1276247 | 38764.2 |
| holliday junction dna helicase subunit ruvb | LACOL_1255 | A5VIX2 | - | 1276253 - 1277269 | 37707.3 |
| holliday junction dna helicase ruva | LACOL_1256 | Q38YR0 | - | 1277288 - 1277881 | 21824.1 |
| dna mismatch repair protein mutl | LACOL_1257 | A5VIX0 | - | 1277991 - 1279940 | 72519.0 |
| dna mismatch repair protein muts | LACOL_1258 | A5VIW9 | - | 1279978 - 1282578 | 97797.0 |
| ribonuclease y rny | LACOL_1259 | Q88UZ5 | - | 1282696 - 1284255 | 57741.6 |
| protein reca | LACOL_1260 | B2GB15 | - | 1284488 - 1285531 | 37260.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.