Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | AFIC_000058 | B6JCP4 | - | 67899 - 68828 | 33952.3 |
| tryptophan synthase subunit alpha | AFIC_000059 | B6JCP3 | - | 68907 - 69743 | 28985.2 |
| tryptophan synthase subunit beta | AFIC_000060 | B6JCP2 | - | 69740 - 70957 | 43888.8 |
| phosphoribosylanthranilate isomerase | AFIC_000061 | A4YJI7 | - | 71027 - 71704 | 23815.7 |
| lapa family protein | AFIC_000062 | Not Available | - | 71748 - 72122 | 13356.6 |
| integration host factor subunit beta | AFIC_000063 | B6JCN9 | - | 72179 - 72487 | 11487.7 |
| signal peptide peptidase sppa | AFIC_000064 | Q55682 | - | 72647 - 73627 | 35004.6 |
| 30s ribosomal protein s1 | AFIC_000065 | Q6NDP1 | - | 73789 - 75489 | 62700.0 |
| (d)cmp kinase | AFIC_000066 | B6JCN5 | - | 75898 - 76527 | 22080.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AFIC_000067 | B6JCN2 | - | 76524 - 77855 | 46094.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
