Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AFIC_000778 | P9WMH2 | - | 815156 - 815854 | 25927.3 |
| mfs transporter | AFIC_000779 | P10903 | + | 816061 - 818802 | 99504.8 |
| nitrate reductase subunit alpha | AFIC_000780 | P09152 | + | 818813 - 822556 | 139634.0 |
| nitrate reductase subunit beta | AFIC_000781 | P19318 | + | 822553 - 824073 | 57277.8 |
| nitrate reductase molybdenum cofactor assembly chaperone | AFIC_000782 | P0AF27 | + | 824073 - 824774 | 25647.4 |
| respiratory nitrate reductase subunit gamma | AFIC_000783 | P11350 | + | 824788 - 825540 | 27923.8 |
| peptidylprolyl isomerase | AFIC_000784 | P23119 | + | 825545 - 826369 | 29662.2 |
| hypothetical protein | AFIC_000785 | Not Available | + | 826383 - 826739 | 12284.3 |
| molybdopterin adenylyltransferase | AFIC_000786 | Q9ZL45 | + | 826736 - 827317 | 20697.1 |
| duf2478 domain-containing protein | AFIC_000787 | Q89EW7 | + | 827286 - 827837 | 19707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
