Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1007 family protein | AFIC_000728 | P44137 | + | 765944 - 766615 | 24553.3 |
| nickel/cobalt transporter | AFIC_000729 | P44136 | + | 766612 - 767748 | 38751.2 |
| ferrochelatase | AFIC_000730 | P28602 | + | 767774 - 768796 | 37960.7 |
| spfh/band 7/phb domain protein | AFIC_000731 | P0AA55 | + | 768924 - 769913 | 35904.2 |
| nfed family protein | AFIC_000732 | P0AAS3 | + | 769924 - 770367 | 16107.0 |
| kpsf/gutq family sugar-phosphate isomerase | AFIC_000733 | Q9HVW0 | - | 770371 - 771345 | 33589.0 |
| outer membrane beta-barrel protein | AFIC_000734 | Not Available | + | 771662 - 773212 | 56015.3 |
| sensor domain-containing diguanylate cyclase | AFIC_000735 | Q55434 | + | 773422 - 774846 | 52763.1 |
| sgnh/gdsl hydrolase family protein | AFIC_000736 | Q07792 | + | 774878 - 775630 | 27056.9 |
| abc transporter substrate-binding protein | AFIC_000737 | Not Available | + | 775648 - 776670 | 36287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
