Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AFIC_000598 | P25888 | - | 628774 - 630306 | 55378.3 |
| chase domain-containing protein | AFIC_000599 | A6X554 | + | 630997 - 632637 | 59866.8 |
| sigma-70 family rna polymerase sigma factor | AFIC_000600 | B3Q6P8 | - | 632743 - 633291 | 19918.5 |
| nepr family anti-sigma factor | AFIC_000601 | Not Available | - | 633291 - 633512 | 7907.43 |
| response regulator | AFIC_000602 | Q0PEV3 | + | 633733 - 634533 | 29091.9 |
| hypothetical protein | AFIC_000603 | Not Available | + | 634698 - 635123 | 14449.6 |
| hypothetical protein | AFIC_000604 | Not Available | - | 635180 - 635599 | 14509.4 |
| hypothetical protein | AFIC_000605 | Not Available | - | 635674 - 636009 | 12021.0 |
| ai-2e family transporter | AFIC_000606 | P44646 | - | 636111 - 637208 | 39557.9 |
| l,d-transpeptidase | AFIC_000607 | P39176 | + | 637482 - 638255 | 27679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
