Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | AFIC_000558 | Q8Z3P2 | - | 584405 - 585778 | 50693.3 |
| response regulator transcription factor | AFIC_000559 | P52076 | - | 585784 - 586458 | 24587.9 |
| hypothetical protein | AFIC_000560 | Not Available | - | 586446 - 587624 | 41236.4 |
| abc transporter substrate-binding protein | AFIC_000561 | Q8YEE8 | - | 587683 - 588855 | 41067.1 |
| lema family protein | AFIC_000562 | A8AVK0 | + | 589169 - 589828 | 23704.2 |
| ygcg family protein | AFIC_000563 | P55140 | + | 589853 - 590716 | 29731.0 |
| tpm domain-containing protein | AFIC_000564 | Not Available | + | 590728 - 591231 | 18454.3 |
| hypothetical protein | AFIC_000565 | Not Available | + | 591348 - 591971 | 22961.7 |
| hypothetical protein | AFIC_000566 | Not Available | + | 592066 - 592452 | 13673.2 |
| glycerate kinase | AFIC_000567 | Q44472 | - | 592537 - 593817 | 44347.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
