Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AFIC_000548 | B6JJP3 | - | 575980 - 576825 | 29948.0 |
| pyrimidine 5'-nucleotidase | AFIC_000549 | Q09893 | - | 576926 - 577618 | 26070.0 |
| acetylglutamate kinase | AFIC_000550 | B6JJP1 | - | 577654 - 578541 | 31053.8 |
| hypothetical protein | AFIC_000551 | Not Available | - | 578627 - 579010 | 12853.3 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | AFIC_000552 | B6JJN9 | - | 579007 - 579672 | 24137.2 |
| membrane protein insertase yidc | AFIC_000553 | Q89BQ0 | - | 579754 - 581586 | 67308.4 |
| ribonuclease p protein component | AFIC_000554 | Q9AA39 | - | 581609 - 581986 | 14196.5 |
| 50s ribosomal protein l34 | AFIC_000555 | A4YLD2 | - | 582016 - 582150 | 5120.46 |
| hamp domain-containing histidine kinase | AFIC_000556 | P19906 | + | 582507 - 583985 | 53603.4 |
| Trna-arg | Not Available | Not Available | + | 584163 - 584239 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
