Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | AFIC_000508 | Q9ZCV8 | - | 534988 - 535575 | 21443.7 |
| penicillin-insensitive murein endopeptidase | AFIC_000509 | A6TC14 | - | 535736 - 536659 | 33807.1 |
| duf1508 domain-containing protein | AFIC_000510 | Q8UJW6 | - | 536797 - 536979 | 6714.86 |
| translation elongation factor 4 | AFIC_000511 | B6JJT7 | - | 537113 - 538918 | 66625.9 |
| hpr family phosphocarrier protein | AFIC_000512 | P23537 | - | 539022 - 539318 | 10444.4 |
| pts sugar transporter subunit iia | AFIC_000513 | P69799 | - | 539322 - 539723 | 14099.3 |
| hpr kinase/phosphatase c-terminal domain-containing protein | AFIC_000514 | P61325 | - | 539934 - 540338 | 14137.4 |
| sensor histidine kinase | AFIC_000515 | P72292 | - | 540375 - 542207 | 66619.6 |
| response regulator transcription factor | AFIC_000516 | P50350 | - | 542282 - 542986 | 26762.5 |
| duf2470 domain-containing protein | AFIC_000517 | Not Available | + | 543211 - 543948 | 26139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
