Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | AFIC_000468 | P17867 | - | 487851 - 489416 | 59324.5 |
| deor family transcriptional regulator | AFIC_000469 | Not Available | + | 489528 - 490178 | 24233.3 |
| hypothetical protein | AFIC_000470 | Not Available | - | 490373 - 490939 | 20371.1 |
| cytochrome b | AFIC_000471 | P75925 | - | 491156 - 491695 | 20244.3 |
| cusa/czca family heavy metal efflux rnd transporter | AFIC_000472 | P94177 | - | 491769 - 495026 | 117537.0 |
| tolc family protein | AFIC_000473 | Not Available | - | 495023 - 496297 | 45631.4 |
| cation-translocating p-type atpase | AFIC_000474 | Q6GIX1 | - | 496408 - 498384 | 69430.7 |
| vit family protein | AFIC_000475 | Q9P6J2 | - | 498387 - 499082 | 23866.0 |
| efflux rnd transporter permease subunit | AFIC_000476 | Q48815 | - | 499656 - 502811 | 112163.0 |
| hypothetical protein | AFIC_000477 | Not Available | - | 502804 - 503820 | 36560.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
