Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000448 | Not Available | + | 466107 - 466490 | 14504.3 |
| helix-turn-helix domain-containing protein | AFIC_000449 | Not Available | - | 466647 - 466874 | 8597.23 |
| recombinase family protein | AFIC_000450 | P17867 | - | 467166 - 468830 | 61722.8 |
| hypothetical protein | AFIC_000451 | Not Available | - | 468909 - 469343 | 16914.5 |
| relaxase domain-containing protein | AFIC_000452 | Q44363 | - | 469542 - 472238 | 96501.2 |
| type iv secretion system dna-binding domain-containing protein | AFIC_000453 | P09130 | - | 472386 - 474158 | 64589.3 |
| hypothetical protein | AFIC_000454 | Not Available | - | 474181 - 474558 | 13467.4 |
| hypothetical protein | AFIC_000455 | Not Available | - | 474558 - 475388 | 30372.6 |
| hypothetical protein | AFIC_000456 | Not Available | - | 475491 - 476672 | 44127.6 |
| hypothetical protein | AFIC_000457 | Not Available | - | 476876 - 477361 | 17734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
