Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | AFIC_000328 | Q87AD4 | - | 339836 - 340243 | 13539.3 |
| sulfite-sensing transcriptional repressor bigr | AFIC_000329 | Q9PFB1 | - | 340240 - 340584 | 12392.1 |
| bifunctional sulfur transferase/dioxygenase blh | AFIC_000330 | Q8UAA9 | - | 340578 - 341870 | 46992.4 |
| hypothetical protein | AFIC_000331 | B4SRK3 | - | 341956 - 343050 | 39035.1 |
| ydcf family protein | AFIC_000332 | Q04310 | + | 343180 - 343788 | 23119.8 |
| udp-n-acetylmuramate--l-alanine ligase | AFIC_000333 | O68008 | + | 343789 - 347736 | 142760.0 |
| Trna-arg | Not Available | Not Available | + | 347738 - 347814 | Not Available |
| yccf domain-containing protein | AFIC_000335 | P0AB12 | - | 347866 - 348270 | 14319.3 |
| metal-binding protein | AFIC_000336 | Not Available | - | 348301 - 348564 | 9780.74 |
| nadh:flavin oxidoreductase/nadh oxidase | AFIC_000337 | Q5KXG9 | - | 348576 - 349676 | 39250.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
