Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | AFIC_000318 | Q8XTT4 | + | 332021 - 333808 | 63176.6 |
| pas domain s-box protein | AFIC_000319 | P10955 | + | 333890 - 334333 | 15924.9 |
| rna polymerase sigma factor | AFIC_000320 | Q06198 | + | 334441 - 335136 | 26344.7 |
| gtp cyclohydrolase i fole | AFIC_000321 | Q8P3B0 | + | 335176 - 335823 | 24464.6 |
| fad-dependent oxidoreductase | AFIC_000322 | Q3TY86 | + | 335840 - 337366 | 54269.0 |
| duf4142 domain-containing protein | AFIC_000323 | Not Available | + | 337493 - 338014 | 18345.1 |
| cupredoxin domain-containing protein | AFIC_000324 | P55020 | + | 338080 - 338367 | 10413.7 |
| group iii truncated hemoglobin | AFIC_000325 | Q0PB48 | - | 338374 - 338832 | 17251.7 |
| tlpa family protein disulfide reductase | AFIC_000326 | Q73B22 | - | 338899 - 339372 | 16944.7 |
| yeee/yede family protein | AFIC_000327 | Q9PFB3 | - | 339414 - 339830 | 14179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
