Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | AFIC_000308 | Q4UKH4 | - | 322473 - 323828 | 48042.2 |
| mbl fold metallo-hydrolase | AFIC_000309 | Q769K2 | + | 324098 - 325159 | 38479.8 |
| simpl domain-containing protein | AFIC_000310 | P0A3U8 | - | 325281 - 325976 | 23578.2 |
| gyri-like domain-containing protein | AFIC_000311 | Not Available | - | 325987 - 326787 | 27712.0 |
| diaminopimelate epimerase | AFIC_000312 | B6JAP3 | + | 326928 - 327800 | 31683.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | AFIC_000313 | Q9ZDB6 | + | 327800 - 329053 | 45546.9 |
| rna pseudouridine synthase | AFIC_000314 | O66114 | - | 329042 - 329776 | 26590.1 |
| signal recognition particle-docking protein ftsy | AFIC_000315 | A9CHH2 | + | 329846 - 330802 | 33651.5 |
| septation protein a | AFIC_000316 | B6JAN9 | + | 330811 - 331413 | 22252.0 |
| marr family transcriptional regulator | AFIC_000317 | Not Available | - | 331426 - 331911 | 18166.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
