Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | AFIC_003140 | A0R607 | + | 3246636 - 3247958 | 48137.5 |
| sdr family nad(p)-dependent oxidoreductase | AFIC_003141 | P43168 | + | 3247960 - 3248706 | 25748.2 |
| nad-dependent epimerase/dehydratase family protein | AFIC_003142 | D4GU72 | + | 3248706 - 3249635 | 34862.1 |
| nad(p)/fad-dependent oxidoreductase | AFIC_003143 | P29273 | + | 3249643 - 3250929 | 48552.7 |
| class i sam-dependent methyltransferase | AFIC_003144 | Q8PK00 | + | 3251154 - 3251807 | 24988.0 |
| gtra family protein | AFIC_003145 | Not Available | + | 3251794 - 3252243 | 16705.4 |
| hypothetical protein | AFIC_003146 | Not Available | + | 3252240 - 3254168 | 70408.5 |
| hypothetical protein | AFIC_003147 | Not Available | + | 3254165 - 3255430 | 46173.4 |
| glycosyltransferase family 2 protein | AFIC_003148 | P55465 | - | 3255527 - 3257644 | 79093.6 |
| dtdp-glucose 4,6-dehydratase | AFIC_003149 | B0RVL0 | + | 3258126 - 3259205 | 39969.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
