Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | AFIC_003120 | Not Available | - | 3224008 - 3224814 | 27417.8 |
| arsenate reductase (glutaredoxin) | AFIC_003121 | Q92R44 | - | 3225150 - 3225545 | 14758.2 |
| acr3 family arsenite efflux transporter | AFIC_003122 | A6TP80 | - | 3225542 - 3226591 | 37399.1 |
| metalloregulator arsr/smtb family transcription factor | AFIC_003123 | P28267 | - | 3226628 - 3226993 | 13139.0 |
| metalloregulator arsr/smtb family transcription factor | AFIC_003124 | O34464 | + | 3227115 - 3227429 | 11264.9 |
| nad(p)-binding domain-containing protein | AFIC_003125 | Q9EQ76 | + | 3227479 - 3228840 | 46916.9 |
| mfs transporter | AFIC_003126 | P32369 | + | 3228845 - 3230065 | 42358.6 |
| helix-turn-helix domain-containing protein | AFIC_003127 | P0ACS6 | - | 3230095 - 3230496 | 15302.5 |
| cation transporter | AFIC_003128 | P13512 | + | 3230564 - 3231280 | 25008.6 |
| fixh family protein | AFIC_003129 | Not Available | + | 3231918 - 3232325 | 14364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
