Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AFIC_003070 | P0A9T9 | + | 3174287 - 3174994 | 24727.8 |
| ftsx-like permease family protein | AFIC_003071 | P77504 | + | 3174987 - 3177524 | 89457.0 |
| bax inhibitor-1/ycca family protein | AFIC_003072 | Q9ZE15 | + | 3177730 - 3178521 | 28298.1 |
| gnat family n-acetyltransferase | AFIC_003073 | P31668 | + | 3178631 - 3179161 | 19004.7 |
| metalloregulator arsr/smtb family transcription factor | AFIC_003074 | Q9PFB1 | - | 3179175 - 3179480 | 11192.7 |
| carboxymuconolactone decarboxylase family protein | AFIC_003075 | P27749 | + | 3179551 - 3179895 | 12110.7 |
| duf2794 domain-containing protein | AFIC_003076 | Not Available | - | 3179899 - 3180264 | 13712.5 |
| duf1223 domain-containing protein | AFIC_003077 | Not Available | - | 3180654 - 3181427 | 27468.6 |
| aconitate hydratase acna | AFIC_003078 | P70920 | - | 3181552 - 3184272 | 98579.9 |
| heme abc exporter atp-binding protein ccma | AFIC_003079 | Q21CV6 | + | 3184491 - 3185093 | 20788.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
