Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_003030 | Not Available | + | 3130962 - 3131768 | 29391.8 |
| Trna-ser | Not Available | Not Available | + | 3131880 - 3131969 | Not Available |
| trehalose-6-phosphate synthase | AFIC_003032 | A4WBR1 | - | 3132092 - 3133561 | 53896.6 |
| trehalose-phosphatase | AFIC_003033 | P31678 | - | 3133760 - 3134560 | 28472.2 |
| mfs transporter | AFIC_003034 | Q46909 | - | 3134580 - 3136037 | 52352.3 |
| amidase | AFIC_003035 | Q7NKF0 | - | 3136182 - 3137747 | 55673.5 |
| hypothetical protein | AFIC_003036 | Not Available | - | 3138062 - 3139234 | 42688.8 |
| 50s ribosomal protein l21 | AFIC_003037 | B6JD24 | + | 3139553 - 3140074 | 18009.3 |
| 50s ribosomal protein l27 | AFIC_003038 | B6JD23 | + | 3140130 - 3140399 | 9300.13 |
| gnat family n-acetyltransferase | AFIC_003039 | Q7VG78 | + | 3140533 - 3141120 | 21973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
