Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AFIC_003000 | P54721 | + | 3095458 - 3095958 | 18044.3 |
| ferrous iron transporter b | AFIC_003001 | Q8F332 | - | 3096010 - 3097893 | 67965.9 |
| ferrous iron transport protein a | AFIC_003002 | Not Available | - | 3097900 - 3098181 | 10028.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | AFIC_003003 | Q89FH0 | - | 3098329 - 3099498 | 43050.3 |
| mekhla domain-containing protein | AFIC_003004 | Not Available | + | 3099629 - 3100090 | 17180.2 |
| hypothetical protein | AFIC_003005 | Not Available | - | 3100100 - 3100576 | 18235.6 |
| duf488 domain-containing protein | AFIC_003006 | Not Available | - | 3100584 - 3101153 | 21326.5 |
| tetr/acrr family transcriptional regulator | AFIC_003007 | O31500 | - | 3101301 - 3101924 | 22885.7 |
| tonb-dependent siderophore receptor | AFIC_003008 | Q47162 | + | 3102078 - 3104342 | 82023.2 |
| hypothetical protein | AFIC_003009 | Not Available | - | 3104756 - 3106060 | 48113.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
