Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp33 family molecular chaperone | AFIC_002980 | P58097 | - | 3075920 - 3076900 | 35385.1 |
| ornithine carbamoyltransferase | AFIC_002981 | Q07GY2 | - | 3076982 - 3077905 | 34155.4 |
| aspartate aminotransferase family protein | AFIC_002982 | Q89VE9 | - | 3077902 - 3079122 | 43055.1 |
| gcra family cell cycle regulator | AFIC_002983 | Not Available | + | 3079589 - 3080095 | 18731.4 |
| phosphate regulon transcriptional regulator phob | AFIC_002984 | Q52990 | - | 3080184 - 3080888 | 26646.1 |
| phosphate signaling complex protein phou | AFIC_002985 | Q52989 | - | 3080899 - 3081615 | 26543.2 |
| phosphate abc transporter atp-binding protein pstb | AFIC_002986 | Q89VF2 | - | 3081633 - 3082415 | 28979.0 |
| phosphate abc transporter permease psta | AFIC_002987 | Q98FL4 | - | 3082451 - 3083296 | 29852.2 |
| phosphate abc transporter permease subunit pstc | AFIC_002988 | Q98FL3 | - | 3083300 - 3084289 | 34829.9 |
| phosphate abc transporter substrate-binding protein psts | AFIC_002989 | Q98FL2 | - | 3084405 - 3085430 | 36318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
