Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | AFIC_002970 | P96587 | + | 3066032 - 3068083 | 75527.0 |
| sco family protein | AFIC_002971 | Q8VYP0 | - | 3068067 - 3068660 | 21563.1 |
| hypothetical protein | AFIC_002972 | Not Available | - | 3068805 - 3069266 | 16450.2 |
| Trna-gly | Not Available | Not Available | + | 3069441 - 3069514 | Not Available |
| 2'-deoxycytidine 5'-triphosphate deaminase | AFIC_002974 | Q18KN9 | - | 3069599 - 3070711 | 40202.1 |
| o-succinylhomoserine sulfhydrylase | AFIC_002975 | P9WGB4 | + | 3070956 - 3072158 | 43611.2 |
| sgnh/gdsl hydrolase family protein | AFIC_002976 | Not Available | - | 3072214 - 3073122 | 32140.7 |
| gdsl-type esterase/lipase family protein | AFIC_002977 | Not Available | - | 3073152 - 3073910 | 26975.4 |
| opgc domain-containing protein | AFIC_002978 | Not Available | - | 3073910 - 3075133 | 45915.1 |
| co2+/mg2+ efflux protein apag | AFIC_002979 | B6JD70 | + | 3075386 - 3075778 | 14644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
