Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | AFIC_002950 | P31833 | - | 3043535 - 3045160 | 59508.4 |
| cytochrome c oxidase subunit ii | AFIC_002951 | Q1RI44 | - | 3045225 - 3046049 | 30509.4 |
| invasion associated locus b family protein | AFIC_002952 | Q8YFD8 | + | 3046508 - 3047044 | 18665.0 |
| metalloprotease tldd | AFIC_002953 | P0AGG9 | + | 3047190 - 3048617 | 50683.9 |
| signal peptidase i | AFIC_002954 | A8GQT7 | + | 3048614 - 3049381 | 27342.6 |
| pan domain-containing protein | AFIC_002955 | Not Available | - | 3049387 - 3049914 | 19302.9 |
| glutamate--cysteine ligase | AFIC_002956 | P46309 | - | 3050117 - 3051487 | 51010.9 |
| marr family transcriptional regulator | AFIC_002957 | Not Available | - | 3051578 - 3052096 | 19227.1 |
| hypothetical protein | AFIC_002958 | Not Available | + | 3052351 - 3055479 | 110084.0 |
| nramp family divalent metal transporter | AFIC_002959 | A5G348 | - | 3055578 - 3056894 | 46358.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
