Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002940 | Not Available | - | 3035131 - 3035823 | 23461.0 |
| gnat family n-acetyltransferase | AFIC_002941 | O31633 | - | 3035964 - 3036551 | 22496.3 |
| insulinase family protein | AFIC_002942 | O86835 | - | 3036673 - 3037962 | 46141.9 |
| threonine synthase | AFIC_002943 | P29363 | - | 3037962 - 3039377 | 50813.8 |
| surf1 family protein | AFIC_002944 | A9UWF0 | - | 3039502 - 3040254 | 27511.2 |
| duf983 domain-containing protein | AFIC_002945 | Not Available | - | 3040251 - 3040652 | 14461.1 |
| cytochrome c oxidase subunit 3 | AFIC_002946 | P06030 | - | 3040781 - 3041638 | 32148.0 |
| cytochrome c oxidase assembly protein | AFIC_002947 | Q1QHV9 | - | 3041691 - 3042305 | 22308.3 |
| hypothetical protein | AFIC_002948 | Not Available | - | 3042307 - 3042474 | 6132.74 |
| heme o synthase | AFIC_002949 | B6JDB7 | - | 3042481 - 3043416 | 33549.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
