Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | AFIC_002930 | Q8D5Z6 | + | 3024423 - 3027998 | 129155.0 |
| response regulator transcription factor | AFIC_002931 | P29369 | - | 3027977 - 3028654 | 24159.2 |
| mhs family mfs transporter | AFIC_002932 | A4QH18 | + | 3029267 - 3030928 | 59387.5 |
| hypothetical protein | AFIC_002933 | Not Available | - | 3031027 - 3031569 | 19104.7 |
| 2-hydroxychromene-2-carboxylate isomerase | AFIC_002934 | Q9X9Q7 | - | 3031593 - 3032216 | 23439.9 |
| atpz/atpi family protein | AFIC_002935 | P15011 | + | 3032510 - 3032863 | 12560.9 |
| f0f1 atp synthase subunit a | AFIC_002936 | B6JDD0 | + | 3032929 - 3033672 | 26778.8 |
| f0f1 atp synthase subunit c | AFIC_002937 | A3PN84 | + | 3033720 - 3033947 | 7562.47 |
| hypothetical protein | AFIC_002938 | B6JDC8 | + | 3034014 - 3034568 | 19669.3 |
| atp f0f1 synthase subunit b | AFIC_002939 | B6JDC7 | + | 3034573 - 3035058 | 17437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
