Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfite dehydrogenase | AFIC_002870 | A0A286R227 | - | 2964270 - 2965673 | 51436.2 |
| tetr/acrr family transcriptional regulator | AFIC_002871 | Q9RAJ1 | + | 2965966 - 2966550 | 21405.0 |
| dmt family transporter | AFIC_002872 | A0A0H2ZHZ4 | + | 2966686 - 2967636 | 34635.1 |
| lysr substrate-binding domain-containing protein | AFIC_002873 | P77559 | - | 2967648 - 2968550 | 33269.9 |
| abc transporter substrate-binding protein | AFIC_002874 | Not Available | + | 2968737 - 2969753 | 36922.8 |
| glucarate dehydratase | AFIC_002875 | P42238 | + | 2969930 - 2971285 | 49487.1 |
| aldolase/citrate lyase family protein | AFIC_002876 | Q83P19 | + | 2971307 - 2972098 | 28156.1 |
| eal domain-containing protein | AFIC_002877 | Q9ABX9 | - | 2972112 - 2974964 | 104658.0 |
| hypothetical protein | AFIC_002878 | Not Available | + | 2975263 - 2975622 | 13098.1 |
| hypothetical protein | AFIC_002879 | Not Available | - | 2975652 - 2976650 | 36251.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
