Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002840 | Not Available | + | 2932202 - 2933296 | 38378.8 |
| inositol monophosphatase | AFIC_002841 | Q98F59 | + | 2933407 - 2934198 | 28509.3 |
| mota/tolq/exbb proton channel family protein | AFIC_002842 | Not Available | + | 2934337 - 2935344 | 36376.5 |
| peptidoglycan -binding protein | AFIC_002843 | P46827 | + | 2935349 - 2936371 | 37418.6 |
| gnat family n-acetyltransferase | AFIC_002844 | P40677 | + | 2936368 - 2936820 | 16919.7 |
| abc transporter transmembrane domain-containing protein | AFIC_002845 | Q9JI39 | - | 2936817 - 2938664 | 65823.8 |
| 50s ribosomal protein l31 | AFIC_002846 | Q1QHM3 | + | 2938845 - 2939072 | 8504.04 |
| duf1465 family protein | AFIC_002847 | Not Available | - | 2939155 - 2939661 | 18537.3 |
| duf1192 domain-containing protein | AFIC_002848 | Not Available | - | 2939994 - 2940185 | 7245.51 |
| nad(p)h-quinone oxidoreductase | AFIC_002849 | Q53FA7 | + | 2940347 - 2941324 | 34175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
