Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00282 family metallophosphoesterase | AFIC_002830 | O31775 | - | 2922932 - 2923798 | 30952.1 |
| 5-formyltetrahydrofolate cyclo-ligase | AFIC_002831 | P44905 | - | 2923804 - 2924382 | 20990.0 |
| Ncrna_class:other | Not Available | Not Available | + | 2924547 - 2924707 | Not Available |
| cell division protein zapa | AFIC_002833 | Not Available | - | 2924785 - 2925168 | 14143.9 |
| duf4164 domain-containing protein | AFIC_002834 | Not Available | - | 2925165 - 2925503 | 12217.2 |
| transketolase | AFIC_002835 | P51010 | + | 2925812 - 2927818 | 70985.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | AFIC_002836 | P51009 | + | 2927917 - 2928924 | 35905.1 |
| phosphoglycerate kinase | AFIC_002837 | Q89U95 | + | 2929076 - 2930275 | 42500.3 |
| fructose-bisphosphate aldolase class i | AFIC_002838 | Q8P5Z7 | + | 2930390 - 2931418 | 37363.9 |
| thiamine phosphate synthase | AFIC_002839 | B6INN5 | + | 2931522 - 2932205 | 23918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
