Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | AFIC_002790 | Q499N4 | - | 2880876 - 2881811 | 33623.3 |
| hypothetical protein | AFIC_002791 | Not Available | - | 2881851 - 2882474 | 21124.3 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | AFIC_002792 | Q92J59 | + | 2882737 - 2883504 | 27943.7 |
| atp phosphoribosyltransferase regulatory subunit | AFIC_002793 | A9MDU5 | + | 2883584 - 2884723 | 40270.7 |
| atp phosphoribosyltransferase | AFIC_002794 | B6JIW1 | + | 2884720 - 2885697 | 34870.8 |
| glycosyltransferase family 2 protein | AFIC_002795 | Q55487 | + | 2885777 - 2886826 | 38246.4 |
| chbg/hpnk family deacetylase | AFIC_002796 | B7LQ59 | + | 2886823 - 2887656 | 30468.7 |
| duf2076 domain-containing protein | AFIC_002797 | P57278 | + | 2887778 - 2888584 | 27771.3 |
| l,d-transpeptidase | AFIC_002798 | P39176 | - | 2888662 - 2889408 | 27338.6 |
| protein phosphatase chez | AFIC_002799 | Not Available | + | 2889701 - 2890471 | 28097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
