Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tautomerase family protein | AFIC_002760 | Q89DI3 | - | 2848202 - 2848399 | 7206.96 |
| histidine--trna ligase | AFIC_002761 | Q21AX3 | - | 2848411 - 2850063 | 61105.6 |
| pilus assembly protein tadg-related protein | AFIC_002762 | Not Available | - | 2850112 - 2851779 | 56311.6 |
| pilus assembly protein | AFIC_002763 | Not Available | - | 2851779 - 2852216 | 15520.8 |
| aspartate aminotransferase family protein | AFIC_002764 | Q9A3Q9 | + | 2852460 - 2853743 | 46107.6 |
| eal domain-containing protein | AFIC_002765 | Q9HYT3 | + | 2853899 - 2855332 | 51109.1 |
| tigr01459 family had-type hydrolase | AFIC_002766 | P46351 | + | 2855426 - 2856289 | 31647.8 |
| response regulator | AFIC_002767 | Q8D0P1 | - | 2856385 - 2856771 | 14113.1 |
| bifunctional riboflavin kinase/fad synthetase | AFIC_002768 | P44957 | + | 2856979 - 2857968 | 35431.3 |
| isoleucine--trna ligase | AFIC_002769 | Q3SPJ6 | + | 2858052 - 2861060 | 112157.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
