Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | AFIC_002730 | P44681 | - | 2822858 - 2823955 | 39455.2 |
| aminoacyl-trna hydrolase | AFIC_002731 | B6JIP3 | - | 2823983 - 2824588 | 22078.4 |
| 50s ribosomal protein l25/general stress protein ctc | AFIC_002732 | B6JIP4 | - | 2824613 - 2825341 | 24852.9 |
| hd domain-containing protein | AFIC_002733 | Q9HWS0 | + | 2825652 - 2826734 | 40280.3 |
| accessory factor ubik family protein | AFIC_002734 | Not Available | - | 2826753 - 2827007 | 9411.19 |
| prolipoprotein diacylglyceryl transferase | AFIC_002735 | Q07RP9 | + | 2827238 - 2828062 | 29796.2 |
| sam-dependent methyltransferase | AFIC_002736 | Q9CWG8 | + | 2828059 - 2829168 | 40445.7 |
| peptidoglycan editing factor pgef | AFIC_002737 | Q9RT03 | + | 2829165 - 2829929 | 27704.9 |
| hypothetical protein | AFIC_002738 | Not Available | + | 2830028 - 2830675 | 21924.9 |
| ribose-phosphate pyrophosphokinase | AFIC_002739 | Q89DJ1 | + | 2830782 - 2831777 | 35573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
