Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002700 | Q45335 | - | 2793862 - 2794689 | 28704.8 |
| outer membrane beta-barrel protein | AFIC_002701 | Q8FVC3 | - | 2794831 - 2795649 | 29437.7 |
| mfs transporter | AFIC_002702 | P52067 | - | 2795908 - 2797152 | 44286.0 |
| phosphoglucosamine mutase | AFIC_002703 | B6JIL2 | - | 2797276 - 2798622 | 48472.6 |
| hypothetical protein | AFIC_002704 | Not Available | - | 2798858 - 2799043 | 6612.6 |
| duf5666 domain-containing protein | AFIC_002705 | Not Available | - | 2799193 - 2799810 | 21429.9 |
| shikimate dehydrogenase | AFIC_002706 | B6JIM2 | - | 2799870 - 2800703 | 29255.0 |
| sulp family inorganic anion transporter | AFIC_002707 | O06984 | - | 2800777 - 2802540 | 60800.0 |
| duf992 domain-containing protein | AFIC_002708 | Not Available | - | 2802537 - 2803016 | 15779.9 |
| duf992 domain-containing protein | AFIC_002709 | Not Available | - | 2803183 - 2803713 | 18339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
