Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AFIC_002680 | P95251 | + | 2773193 - 2773924 | 28139.9 |
| pin domain-containing protein | AFIC_002681 | Not Available | - | 2774233 - 2775150 | 35395.9 |
| site-specific dna-methyltransferase | AFIC_002682 | P11409 | + | 2775281 - 2776555 | 46987.6 |
| hypothetical protein | AFIC_002683 | Not Available | - | 2776552 - 2777475 | 34015.5 |
| aaa family atpase | AFIC_002684 | A1RV38 | - | 2777787 - 2778911 | 41147.8 |
| hypothetical protein | AFIC_002685 | Not Available | - | 2778908 - 2780335 | 53429.6 |
| Trna-glu | Not Available | Not Available | + | 2780434 - 2780508 | Not Available |
| hypothetical protein | AFIC_002687 | Not Available | - | 2780571 - 2780906 | 11780.6 |
| rlua family pseudouridine synthase | AFIC_002688 | P50513 | + | 2780962 - 2781960 | 35400.6 |
| rna polymerase sigma factor rpoh | AFIC_002689 | P50507 | + | 2782181 - 2783080 | 34121.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
