Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hypb | AFIC_002660 | P0AAN4 | + | 2753251 - 2754003 | 27253.7 |
| sigma-54 dependent transcriptional regulator | AFIC_002661 | P29267 | + | 2754006 - 2755514 | 56263.6 |
| zinc ribbon domain-containing protein yjdm | AFIC_002662 | P0AFJ3 | + | 2755746 - 2756099 | 12620.9 |
| alpha/beta hydrolase | AFIC_002663 | B7KWT4 | - | 2756199 - 2756984 | 27504.3 |
| abc transporter atp-binding protein | AFIC_002664 | P21630 | - | 2756993 - 2757712 | 25463.9 |
| abc transporter atp-binding protein | AFIC_002665 | P21629 | - | 2757702 - 2758445 | 27402.5 |
| branched-chain amino acid abc transporter permease | AFIC_002666 | P22729 | - | 2758442 - 2759446 | 36102.3 |
| branched-chain amino acid abc transporter permease | AFIC_002667 | P21627 | - | 2759446 - 2760306 | 30406.6 |
| abc transporter substrate-binding protein | AFIC_002668 | Q8YC99 | - | 2760331 - 2761557 | 44334.0 |
| gntr family transcriptional regulator | AFIC_002669 | P0ACM2 | + | 2761800 - 2762465 | 24806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
