Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | AFIC_002650 | O33406 | + | 2746151 - 2747965 | 67170.9 |
| ni/fe-hydrogenase, b-type cytochrome subunit | AFIC_002651 | P23000 | + | 2747975 - 2748718 | 28550.9 |
| hyad/hybd family hydrogenase maturation endopeptidase | AFIC_002652 | Q03004 | + | 2748966 - 2749583 | 22446.1 |
| hypc/hybg/hupf family hydrogenase formation chaperone | AFIC_002653 | P27651 | + | 2749585 - 2749908 | 11456.8 |
| hydrogenase | AFIC_002654 | Q03006 | + | 2749918 - 2750304 | 14416.3 |
| hydrogenase expression/formation protein | AFIC_002655 | Q03007 | + | 2750316 - 2751152 | 29991.4 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002656 | P48343 | + | 2751149 - 2751364 | 8053.52 |
| [nife]-hydrogenase assembly chaperone hybe | AFIC_002657 | Q03009 | + | 2751353 - 2751997 | 23157.2 |
| nickel-dependent hydrogenase large subunit | AFIC_002658 | P30797 | + | 2751994 - 2752917 | 33253.1 |
| hydrogenase maturation nickel metallochaperone hypa | AFIC_002659 | A1B6P4 | + | 2752919 - 2753251 | 11846.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
